Chris Rorden's Lab

Tools for Medical Imaging

130 followers
University of South Carolina
http://www.mricro.com

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dcm2niix dcm2niix Public

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

C++ 1.2k 261
MRIcroGL MRIcroGL Public

v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

Python 285 38
niimath niimath Public

niimath - a clone of fslmaths. Try the live demo:

C 81 23
spmScripts spmScripts Public

Handy scripts for SPM

MATLAB 77 28
MRIcroWeb MRIcroWeb Public

NIfTI volume rendering using WebGL

JavaScript 48 14
NIfTIspace NIfTIspace Public

A single NIfTI image saved with all 48 spatial rotation permutations

31 1

Repositories

niimath Public
niimath - a clone of fslmaths. Try the live demo:

rordenlab/niimath’s past year of commit activity

C 81 23 3 0 Updated Jul 2, 2026
datalad-rs Public
Keep code, data, containers under control with git and git-annex

rordenlab/datalad-rs’s past year of commit activity

Rust 0 MIT 0 0 0 Updated Jun 29, 2026
bids-validator-rs Public
Rust validator for the Brain Imaging Data Structure

rordenlab/bids-validator-rs’s past year of commit activity

Rust 0 MIT 1 0 0 Updated Jun 29, 2026
dcm2niix Public
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

rordenlab/dcm2niix’s past year of commit activity

C++ 1,172 261 1 0 Updated Jun 29, 2026
niimath_gpl Public
GPL components for niimath

rordenlab/niimath_gpl’s past year of commit activity

C 0 GPL-2.0 0 0 0 Updated Jun 28, 2026
dwi2trx Public
Browser-only diffusion MRI pipeline: convert DICOMs, fit tensors, and track streamlines locally with WebGPU.

rordenlab/dwi2trx’s past year of commit activity

TypeScript 1 BSD-2-Clause 0 0 0 Updated Jun 25, 2026
SIAM Public Forked from romainVala/SIAM
Full head segmentation

rordenlab/SIAM’s past year of commit activity

Python 0 Apache-2.0 7 0 0 Updated May 19, 2026
afni Public Forked from afni/afni
Official AFNI source and documentation

rordenlab/afni’s past year of commit activity

C 0 118 0 0 Updated Apr 17, 2026
allineate-benchmark Public
Benchmark for 3dAllineate optimizations

rordenlab/allineate-benchmark’s past year of commit activity

Shell 0 CC0-1.0 0 0 0 Updated Apr 17, 2026
niivuegpu-demo Public
WebGPU/WebGL2 backends

rordenlab/niivuegpu-demo’s past year of commit activity

0 0 0 0 Updated Feb 2, 2026

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